Added OceanBase as an option for the vector store in Dify (#10010)

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powerfool 2024-10-29 21:10:18 +08:00 committed by GitHub
parent 5580bcf870
commit 878d13ef42
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17 changed files with 427 additions and 2 deletions

1
.gitignore vendored
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@ -174,6 +174,7 @@ docker/volumes/unstructured/*
docker/volumes/pgvector/data/* docker/volumes/pgvector/data/*
docker/volumes/pgvecto_rs/data/* docker/volumes/pgvecto_rs/data/*
docker/volumes/couchbase/* docker/volumes/couchbase/*
docker/volumes/oceanbase/*
docker/nginx/conf.d/default.conf docker/nginx/conf.d/default.conf
docker/nginx/ssl/* docker/nginx/ssl/*

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@ -249,6 +249,14 @@ VIKINGDB_SCHEMA=http
VIKINGDB_CONNECTION_TIMEOUT=30 VIKINGDB_CONNECTION_TIMEOUT=30
VIKINGDB_SOCKET_TIMEOUT=30 VIKINGDB_SOCKET_TIMEOUT=30
# OceanBase Vector configuration
OCEANBASE_VECTOR_HOST=127.0.0.1
OCEANBASE_VECTOR_PORT=2881
OCEANBASE_VECTOR_USER=root@test
OCEANBASE_VECTOR_PASSWORD=
OCEANBASE_VECTOR_DATABASE=test
OCEANBASE_MEMORY_LIMIT=6G
# Upload configuration # Upload configuration
UPLOAD_FILE_SIZE_LIMIT=15 UPLOAD_FILE_SIZE_LIMIT=15
UPLOAD_FILE_BATCH_LIMIT=5 UPLOAD_FILE_BATCH_LIMIT=5

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@ -279,6 +279,7 @@ def migrate_knowledge_vector_database():
VectorType.VIKINGDB, VectorType.VIKINGDB,
VectorType.UPSTASH, VectorType.UPSTASH,
VectorType.COUCHBASE, VectorType.COUCHBASE,
VectorType.OCEANBASE,
} }
page = 1 page = 1
while True: while True:

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@ -21,6 +21,7 @@ from configs.middleware.vdb.couchbase_config import CouchbaseConfig
from configs.middleware.vdb.elasticsearch_config import ElasticsearchConfig from configs.middleware.vdb.elasticsearch_config import ElasticsearchConfig
from configs.middleware.vdb.milvus_config import MilvusConfig from configs.middleware.vdb.milvus_config import MilvusConfig
from configs.middleware.vdb.myscale_config import MyScaleConfig from configs.middleware.vdb.myscale_config import MyScaleConfig
from configs.middleware.vdb.oceanbase_config import OceanBaseVectorConfig
from configs.middleware.vdb.opensearch_config import OpenSearchConfig from configs.middleware.vdb.opensearch_config import OpenSearchConfig
from configs.middleware.vdb.oracle_config import OracleConfig from configs.middleware.vdb.oracle_config import OracleConfig
from configs.middleware.vdb.pgvector_config import PGVectorConfig from configs.middleware.vdb.pgvector_config import PGVectorConfig
@ -257,5 +258,6 @@ class MiddlewareConfig(
VikingDBConfig, VikingDBConfig,
UpstashConfig, UpstashConfig,
TidbOnQdrantConfig, TidbOnQdrantConfig,
OceanBaseVectorConfig,
): ):
pass pass

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@ -0,0 +1,35 @@
from typing import Optional
from pydantic import Field, PositiveInt
from pydantic_settings import BaseSettings
class OceanBaseVectorConfig(BaseSettings):
"""
Configuration settings for OceanBase Vector database
"""
OCEANBASE_VECTOR_HOST: Optional[str] = Field(
description="Hostname or IP address of the OceanBase Vector server (e.g. 'localhost')",
default=None,
)
OCEANBASE_VECTOR_PORT: Optional[PositiveInt] = Field(
description="Port number on which the OceanBase Vector server is listening (default is 2881)",
default=2881,
)
OCEANBASE_VECTOR_USER: Optional[str] = Field(
description="Username for authenticating with the OceanBase Vector database",
default=None,
)
OCEANBASE_VECTOR_PASSWORD: Optional[str] = Field(
description="Password for authenticating with the OceanBase Vector database",
default=None,
)
OCEANBASE_VECTOR_DATABASE: Optional[str] = Field(
description="Name of the OceanBase Vector database to connect to",
default=None,
)

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@ -628,6 +628,7 @@ class DatasetRetrievalSettingApi(Resource):
| VectorType.BAIDU | VectorType.BAIDU
| VectorType.VIKINGDB | VectorType.VIKINGDB
| VectorType.UPSTASH | VectorType.UPSTASH
| VectorType.OCEANBASE
): ):
return {"retrieval_method": [RetrievalMethod.SEMANTIC_SEARCH.value]} return {"retrieval_method": [RetrievalMethod.SEMANTIC_SEARCH.value]}
case ( case (
@ -669,6 +670,7 @@ class DatasetRetrievalSettingMockApi(Resource):
| VectorType.BAIDU | VectorType.BAIDU
| VectorType.VIKINGDB | VectorType.VIKINGDB
| VectorType.UPSTASH | VectorType.UPSTASH
| VectorType.OCEANBASE
): ):
return {"retrieval_method": [RetrievalMethod.SEMANTIC_SEARCH.value]} return {"retrieval_method": [RetrievalMethod.SEMANTIC_SEARCH.value]}
case ( case (

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@ -0,0 +1,209 @@
import json
import logging
import math
from typing import Any
from pydantic import BaseModel, model_validator
from pyobvector import VECTOR, ObVecClient
from sqlalchemy import JSON, Column, String, func
from sqlalchemy.dialects.mysql import LONGTEXT
from configs import dify_config
from core.rag.datasource.vdb.vector_base import BaseVector
from core.rag.datasource.vdb.vector_factory import AbstractVectorFactory
from core.rag.datasource.vdb.vector_type import VectorType
from core.rag.embedding.embedding_base import Embeddings
from core.rag.models.document import Document
from extensions.ext_redis import redis_client
from models.dataset import Dataset
logger = logging.getLogger(__name__)
DEFAULT_OCEANBASE_HNSW_BUILD_PARAM = {"M": 16, "efConstruction": 256}
DEFAULT_OCEANBASE_HNSW_SEARCH_PARAM = {"efSearch": 64}
OCEANBASE_SUPPORTED_VECTOR_INDEX_TYPE = "HNSW"
DEFAULT_OCEANBASE_VECTOR_METRIC_TYPE = "l2"
class OceanBaseVectorConfig(BaseModel):
host: str
port: int
user: str
password: str
database: str
@model_validator(mode="before")
@classmethod
def validate_config(cls, values: dict) -> dict:
if not values["host"]:
raise ValueError("config OCEANBASE_VECTOR_HOST is required")
if not values["port"]:
raise ValueError("config OCEANBASE_VECTOR_PORT is required")
if not values["user"]:
raise ValueError("config OCEANBASE_VECTOR_USER is required")
if not values["database"]:
raise ValueError("config OCEANBASE_VECTOR_DATABASE is required")
return values
class OceanBaseVector(BaseVector):
def __init__(self, collection_name: str, config: OceanBaseVectorConfig):
super().__init__(collection_name)
self._config = config
self._hnsw_ef_search = -1
self._client = ObVecClient(
uri=f"{self._config.host}:{self._config.port}",
user=self._config.user,
password=self._config.password,
db_name=self._config.database,
)
def get_type(self) -> str:
return VectorType.OCEANBASE
def create(self, texts: list[Document], embeddings: list[list[float]], **kwargs):
self._vec_dim = len(embeddings[0])
self._create_collection()
self.add_texts(texts, embeddings)
def _create_collection(self) -> None:
lock_name = "vector_indexing_lock_" + self._collection_name
with redis_client.lock(lock_name, timeout=20):
collection_exist_cache_key = "vector_indexing_" + self._collection_name
if redis_client.get(collection_exist_cache_key):
return
if self._client.check_table_exists(self._collection_name):
return
self.delete()
cols = [
Column("id", String(36), primary_key=True, autoincrement=False),
Column("vector", VECTOR(self._vec_dim)),
Column("text", LONGTEXT),
Column("metadata", JSON),
]
vidx_params = self._client.prepare_index_params()
vidx_params.add_index(
field_name="vector",
index_type=OCEANBASE_SUPPORTED_VECTOR_INDEX_TYPE,
index_name="vector_index",
metric_type=DEFAULT_OCEANBASE_VECTOR_METRIC_TYPE,
params=DEFAULT_OCEANBASE_HNSW_BUILD_PARAM,
)
self._client.create_table_with_index_params(
table_name=self._collection_name,
columns=cols,
vidxs=vidx_params,
)
vals = []
params = self._client.perform_raw_text_sql("SHOW PARAMETERS LIKE '%ob_vector_memory_limit_percentage%'")
for row in params:
val = int(row[6])
vals.append(val)
if len(vals) == 0:
print("ob_vector_memory_limit_percentage not found in parameters.")
exit(1)
if any(val == 0 for val in vals):
try:
self._client.perform_raw_text_sql("ALTER SYSTEM SET ob_vector_memory_limit_percentage = 30")
except Exception as e:
raise Exception(
"Failed to set ob_vector_memory_limit_percentage. "
+ "Maybe the database user has insufficient privilege.",
e,
)
redis_client.set(collection_exist_cache_key, 1, ex=3600)
def add_texts(self, documents: list[Document], embeddings: list[list[float]], **kwargs):
ids = self._get_uuids(documents)
for id, doc, emb in zip(ids, documents, embeddings):
self._client.insert(
table_name=self._collection_name,
data={
"id": id,
"vector": emb,
"text": doc.page_content,
"metadata": doc.metadata,
},
)
def text_exists(self, id: str) -> bool:
cur = self._client.get(table_name=self._collection_name, id=id)
return cur.rowcount != 0
def delete_by_ids(self, ids: list[str]) -> None:
self._client.delete(table_name=self._collection_name, ids=ids)
def get_ids_by_metadata_field(self, key: str, value: str) -> list[str]:
cur = self._client.get(
table_name=self._collection_name,
where_clause=f"metadata->>'$.{key}' = '{value}'",
output_column_name=["id"],
)
return [row[0] for row in cur]
def delete_by_metadata_field(self, key: str, value: str) -> None:
ids = self.get_ids_by_metadata_field(key, value)
self.delete_by_ids(ids)
def search_by_full_text(self, query: str, **kwargs: Any) -> list[Document]:
return []
def search_by_vector(self, query_vector: list[float], **kwargs: Any) -> list[Document]:
ef_search = kwargs.get("ef_search", self._hnsw_ef_search)
if ef_search != self._hnsw_ef_search:
self._client.set_ob_hnsw_ef_search(ef_search)
self._hnsw_ef_search = ef_search
topk = kwargs.get("top_k", 10)
cur = self._client.ann_search(
table_name=self._collection_name,
vec_column_name="vector",
vec_data=query_vector,
topk=topk,
distance_func=func.l2_distance,
output_column_names=["text", "metadata"],
with_dist=True,
)
docs = []
for text, metadata, distance in cur:
metadata = json.loads(metadata)
metadata["score"] = 1 - distance / math.sqrt(2)
docs.append(
Document(
page_content=text,
metadata=metadata,
)
)
return docs
def delete(self) -> None:
self._client.drop_table_if_exist(self._collection_name)
class OceanBaseVectorFactory(AbstractVectorFactory):
def init_vector(
self,
dataset: Dataset,
attributes: list,
embeddings: Embeddings,
) -> BaseVector:
if dataset.index_struct_dict:
class_prefix: str = dataset.index_struct_dict["vector_store"]["class_prefix"]
collection_name = class_prefix.lower()
else:
dataset_id = dataset.id
collection_name = Dataset.gen_collection_name_by_id(dataset_id).lower()
dataset.index_struct = json.dumps(self.gen_index_struct_dict(VectorType.OCEANBASE, collection_name))
return OceanBaseVector(
collection_name,
OceanBaseVectorConfig(
host=dify_config.OCEANBASE_VECTOR_HOST,
port=dify_config.OCEANBASE_VECTOR_PORT,
user=dify_config.OCEANBASE_VECTOR_USER,
password=(dify_config.OCEANBASE_VECTOR_PASSWORD or ""),
database=dify_config.OCEANBASE_VECTOR_DATABASE,
),
)

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@ -134,6 +134,10 @@ class Vector:
from core.rag.datasource.vdb.tidb_on_qdrant.tidb_on_qdrant_vector import TidbOnQdrantVectorFactory from core.rag.datasource.vdb.tidb_on_qdrant.tidb_on_qdrant_vector import TidbOnQdrantVectorFactory
return TidbOnQdrantVectorFactory return TidbOnQdrantVectorFactory
case VectorType.OCEANBASE:
from core.rag.datasource.vdb.oceanbase.oceanbase_vector import OceanBaseVectorFactory
return OceanBaseVectorFactory
case _: case _:
raise ValueError(f"Vector store {vector_type} is not supported.") raise ValueError(f"Vector store {vector_type} is not supported.")

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@ -21,3 +21,4 @@ class VectorType(str, Enum):
VIKINGDB = "vikingdb" VIKINGDB = "vikingdb"
UPSTASH = "upstash" UPSTASH = "upstash"
TIDB_ON_QDRANT = "tidb_on_qdrant" TIDB_ON_QDRANT = "tidb_on_qdrant"
OCEANBASE = "oceanbase"

67
api/poetry.lock generated
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@ -1,4 +1,4 @@
# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. # This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand.
[[package]] [[package]]
name = "aiohappyeyeballs" name = "aiohappyeyeballs"
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@ -10919,4 +10982,4 @@ cffi = ["cffi (>=1.11)"]
[metadata] [metadata]
lock-version = "2.0" lock-version = "2.0"
python-versions = ">=3.10,<3.13" python-versions = ">=3.10,<3.13"
content-hash = "52552faf5f4823056eb48afe05349ab2f0e9a5bc42105211ccbbb54b59e27b59" content-hash = "ef927b98c33d704d680e08db0e5c7d9a4e05454c66fcd6a5f656a65eb08e886b"

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@ -247,6 +247,7 @@ pgvecto-rs = { version = "~0.2.1", extras = ['sqlalchemy'] }
pgvector = "0.2.5" pgvector = "0.2.5"
pymilvus = "~2.4.4" pymilvus = "~2.4.4"
pymochow = "1.3.1" pymochow = "1.3.1"
pyobvector = "~0.1.6"
qdrant-client = "1.7.3" qdrant-client = "1.7.3"
tcvectordb = "1.3.2" tcvectordb = "1.3.2"
tidb-vector = "0.0.9" tidb-vector = "0.0.9"

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@ -0,0 +1,71 @@
from unittest.mock import MagicMock, patch
import pytest
from core.rag.datasource.vdb.oceanbase.oceanbase_vector import (
OceanBaseVector,
OceanBaseVectorConfig,
)
from tests.integration_tests.vdb.__mock.tcvectordb import setup_tcvectordb_mock
from tests.integration_tests.vdb.test_vector_store import (
AbstractVectorTest,
get_example_text,
setup_mock_redis,
)
@pytest.fixture
def oceanbase_vector():
return OceanBaseVector(
"dify_test_collection",
config=OceanBaseVectorConfig(
host="127.0.0.1",
port="2881",
user="root@test",
database="test",
password="test",
),
)
class OceanBaseVectorTest(AbstractVectorTest):
def __init__(self, vector: OceanBaseVector):
super().__init__()
self.vector = vector
def search_by_vector(self):
hits_by_vector = self.vector.search_by_vector(query_vector=self.example_embedding)
assert len(hits_by_vector) == 0
def search_by_full_text(self):
hits_by_full_text = self.vector.search_by_full_text(query=get_example_text())
assert len(hits_by_full_text) == 0
def text_exists(self):
exist = self.vector.text_exists(self.example_doc_id)
assert exist == True
def get_ids_by_metadata_field(self):
ids = self.vector.get_ids_by_metadata_field(key="document_id", value=self.example_doc_id)
assert len(ids) == 0
@pytest.fixture
def setup_mock_oceanbase_client():
with patch("core.rag.datasource.vdb.oceanbase.oceanbase_vector.ObVecClient", new_callable=MagicMock) as mock_client:
yield mock_client
@pytest.fixture
def setup_mock_oceanbase_vector(oceanbase_vector):
with patch.object(oceanbase_vector, "_client"):
yield oceanbase_vector
def test_oceanbase_vector(
setup_mock_redis,
setup_mock_oceanbase_client,
setup_mock_oceanbase_vector,
oceanbase_vector,
):
OceanBaseVectorTest(oceanbase_vector).run_all_tests()

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@ -13,3 +13,4 @@ pytest api/tests/integration_tests/vdb/chroma \
api/tests/integration_tests/vdb/tcvectordb \ api/tests/integration_tests/vdb/tcvectordb \
api/tests/integration_tests/vdb/upstash \ api/tests/integration_tests/vdb/upstash \
api/tests/integration_tests/vdb/couchbase \ api/tests/integration_tests/vdb/couchbase \
api/tests/integration_tests/vdb/oceanbase \

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@ -517,6 +517,14 @@ VIKINGDB_SCHEMA=http
VIKINGDB_CONNECTION_TIMEOUT=30 VIKINGDB_CONNECTION_TIMEOUT=30
VIKINGDB_SOCKET_TIMEOUT=30 VIKINGDB_SOCKET_TIMEOUT=30
# OceanBase Vector configuration, only available when VECTOR_STORE is `oceanbase`
OCEANBASE_VECTOR_HOST=oceanbase-vector
OCEANBASE_VECTOR_PORT=2881
OCEANBASE_VECTOR_USER=root@test
OCEANBASE_VECTOR_PASSWORD=
OCEANBASE_VECTOR_DATABASE=test
OCEANBASE_MEMORY_LIMIT=6G
# ------------------------------ # ------------------------------
# Knowledge Configuration # Knowledge Configuration
# ------------------------------ # ------------------------------

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@ -243,6 +243,12 @@ x-shared-env: &shared-api-worker-env
POSITION_PROVIDER_INCLUDES: ${POSITION_PROVIDER_INCLUDES:-} POSITION_PROVIDER_INCLUDES: ${POSITION_PROVIDER_INCLUDES:-}
POSITION_PROVIDER_EXCLUDES: ${POSITION_PROVIDER_EXCLUDES:-} POSITION_PROVIDER_EXCLUDES: ${POSITION_PROVIDER_EXCLUDES:-}
MAX_VARIABLE_SIZE: ${MAX_VARIABLE_SIZE:-204800} MAX_VARIABLE_SIZE: ${MAX_VARIABLE_SIZE:-204800}
OCEANBASE_VECTOR_HOST: ${OCEANBASE_VECTOR_HOST:-http://oceanbase-vector}
OCEANBASE_VECTOR_PORT: ${OCEANBASE_VECTOR_PORT:-2881}
OCEANBASE_VECTOR_USER: ${OCEANBASE_VECTOR_USER:-root@test}
OCEANBASE_VECTOR_PASSWORD: ${OCEANBASE_VECTOR_PASSWORD:-""}
OCEANBASE_VECTOR_DATABASE: ${OCEANBASE_VECTOR_DATABASE:-test}
OCEANBASE_MEMORY_LIMIT: ${OCEANBASE_MEMORY_LIMIT:-6G}
services: services:
# API service # API service
@ -570,6 +576,18 @@ services:
CHROMA_SERVER_AUTHN_PROVIDER: ${CHROMA_SERVER_AUTHN_PROVIDER:-chromadb.auth.token_authn.TokenAuthenticationServerProvider} CHROMA_SERVER_AUTHN_PROVIDER: ${CHROMA_SERVER_AUTHN_PROVIDER:-chromadb.auth.token_authn.TokenAuthenticationServerProvider}
IS_PERSISTENT: ${CHROMA_IS_PERSISTENT:-TRUE} IS_PERSISTENT: ${CHROMA_IS_PERSISTENT:-TRUE}
# OceanBase vector database
oceanbase-vector:
image: quay.io/oceanbase/oceanbase-ce:4.3.3.0-100000142024101215
profiles:
- oceanbase-vector
restart: always
volumes:
- ./volumes/oceanbase/data:/root/ob
- ./volumes/oceanbase/conf:/root/.obd/cluster
environment:
OB_MEMORY_LIMIT: ${OCEANBASE_MEMORY_LIMIT:-6G}
# Oracle vector database # Oracle vector database
oracle: oracle:
image: container-registry.oracle.com/database/free:latest image: container-registry.oracle.com/database/free:latest